[gpfsug-discuss] big difference between output of 'mmlsquota' and 'du'?

Sobey, Richard A r.sobey at imperial.ac.uk
Mon Sep 12 21:26:51 BST 2016


My thoughts exactly.

Richard

From: gpfsug-discuss-bounces at spectrumscale.org [mailto:gpfsug-discuss-bounces at spectrumscale.org] On Behalf Of Buterbaugh, Kevin L
Sent: 12 September 2016 20:08
To: gpfsug main discussion list <gpfsug-discuss at spectrumscale.org>
Subject: Re: [gpfsug-discuss] big difference between output of 'mmlsquota' and 'du'?

Hi Alex,

While the numbers don’t match exactly, they’re close enough to prompt me to ask if data replication is possibly set to two?  Thanks…

Kevin

On Sep 12, 2016, at 2:03 PM, Alex Chekholko <chekh at stanford.edu<mailto:chekh at stanford.edu>> wrote:

Hi,

For a fileset with a quota on it, we have mmlsquota reporting 39TB utilization (out of 50TB quota), with 0 in_doubt.

Running a 'du' on the same directory (where the fileset is junctioned) shows 21TB usage.

I looked for sparse files (files that report different size via ls vs du).  I looked at 'du --apparent-size ...'

https://en.wikipedia.org/wiki/Sparse_file

What else could it be?

Is there some attribute I can scan for inside GPFS?
Maybe where FILE_SIZE does not equal KB_ALLOCATED?
https://www.ibm.com/support/knowledgecenter/STXKQY_4.2.0/com.ibm.spectrum.scale.v4r2.adv.doc/bl1adv_usngfileattrbts.htm


[root at scg-gs0 ~]# du -sm --apparent-size /srv/gsfs0/projects/gbsc/*
3977 /srv/gsfs0/projects/gbsc/Backups
1 /srv/gsfs0/projects/gbsc/benchmark
13109 /srv/gsfs0/projects/gbsc/Billing
198719 /srv/gsfs0/projects/gbsc/Clinical
1 /srv/gsfs0/projects/gbsc/Clinical_Vendors
1206523 /srv/gsfs0/projects/gbsc/Data
1 /srv/gsfs0/projects/gbsc/iPoP
123165 /srv/gsfs0/projects/gbsc/Macrogen
58676 /srv/gsfs0/projects/gbsc/Misc
6625890 /srv/gsfs0/projects/gbsc/mva
1 /srv/gsfs0/projects/gbsc/Proj
17 /srv/gsfs0/projects/gbsc/Projects
3290502 /srv/gsfs0/projects/gbsc/Resources
1 /srv/gsfs0/projects/gbsc/SeqCenter
1 /srv/gsfs0/projects/gbsc/share
514041 /srv/gsfs0/projects/gbsc/SNAP_Scoring
1 /srv/gsfs0/projects/gbsc/TCGA_Variants
267873 /srv/gsfs0/projects/gbsc/tools
9597797 /srv/gsfs0/projects/gbsc/workspace

(adds up to about 21TB)

[root at scg-gs0 ~]# mmlsquota -j projects.gbsc --block-size=G gsfs0
                        Block Limits  |     File Limits
Filesystem type             GB      quota      limit   in_doubt    grace |    files   quota    limit in_doubt    grace  Remarks
gsfs0      FILESET       39889      51200      51200          0     none |  1663212       0        0        4     none


[root at scg-gs0 ~]# mmlsfileset gsfs0 |grep gbsc
projects.gbsc            Linked    /srv/gsfs0/projects/gbsc

Regards,
--
Alex Chekholko chekh at stanford.edu<mailto:chekh at stanford.edu>

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Kevin Buterbaugh - Senior System Administrator
Vanderbilt University - Advanced Computing Center for Research and Education
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